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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51957000_51957476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51957000 - 51957476

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTAATGGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTATTTTTAATG

Flanking Amino Acid:

TCCSFGLNPCGFFTMSRRRI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

74.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.8

0.38

1.1

60.8

44.4

Minor 5ss

45.7

-0.4

2.5

54.4

45.2

Minor BPS

66.3

0.37

1.3

64.21

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016324

51918034 - 51967194

49161