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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51957704_51961930_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

51957704 - 51961930

Intron Length:

4227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

GCATTTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

CCTTCCTGCATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.3

79.8

35.3

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

79.1

0.65

0.9

72.4

37.6

Minor 5ss

40.8

-1

2.8

39.1

Minor BPS

53.9

0.2

72.16

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016324

51918034 - 51967194

49161