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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52011470_52013953_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52011470 - 52013953

Intron Length:

2484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATGCAAA

5'SS Class:

major

3'SS Sequence:

ACTGTCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

ATTCCTTTATGC

Flanking Amino Acid:

PPPPAVPYSPRDEKGSFVYG

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

67.2

39.8

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

78.1

0.63

0.9

73.9

36.2

Minor 5ss

45.3

-0.5

2.6

57.4

Minor BPS

51.8

0.04

1.9

65.92

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045402

52006135 - 52041301

35167

ENSAPLT00000030994

52006135 - 52058815

52681

ENSAPLT00000006481

52008959 - 52051332

42374