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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52014079_52015542_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52014079 - 52015542

Intron Length:

1464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTAACATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

AGTTATCTAACA

Flanking Amino Acid:

NLRWKPPLVQTSPPLTSTQS

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

71.2

40.6

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

75.1

0.56

0.9

70.6

39.4

Minor 5ss

-2.4

2.7

33.4

41.8

Minor BPS

54.2

0.13

1.8

68.62

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045402

52006135 - 52041301

35167

ENSAPLT00000030994

52006135 - 52058815

52681

ENSAPLT00000006481

52008959 - 52051332

42374