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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52027420_52034107_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52027420 - 52034107

Intron Length:

6688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTAGTTAA

5'SS Class:

major

3'SS Sequence:

ATATTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

ATTTATTGGACT

Flanking Amino Acid:

LEAVDLLCALNYGLETDNMK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

74.1

Major BPS

83.8

0.84

73.6

41.8

Major PPT

83.5

0.75

0.8

77.9

35.6

Minor 5ss

-1.6

2.6

38.9

40.5

Minor BPS

58.3

0.34

1.7

79.21

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045402

52006135 - 52041301

35167

ENSAPLT00000030994

52006135 - 52058815

52681

ENSAPLT00000006481

52008959 - 52051332

42374