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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52193343_52199026_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52193343 - 52199026

Intron Length:

5684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCAGTA

5'SS Class:

major

3'SS Sequence:

TTTTTCCTAGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAG

U12 Branch Point Sequence:

TTTTCCTAGAAG

Flanking Amino Acid:

PLEQSVSFNKLMDRFDFGEE

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.2

66.1

40.1

Major BPS

63.2

0.33

1.5

71.6

36.4

Major PPT

73.9

0.54

77.2

30.4

Minor 5ss

38.2

-1.3

3.7

55.5

48.7

Minor BPS

60.8

0.19

1.9

71.8

41.2

Associated Gene:

Gene:

SCAF8

Ensembl Gene ID:

ENSAPLG00000005765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031141

52161786 - 52213429

51644

ENSAPLT00000025247

52161786 - 52213429

51644

ENSAPLT00000047798

52146459 - 52213429

66971