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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52315990_52364223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

52315990 - 52364223

Intron Length:

48234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTTG

5'SS Class:

major

3'SS Sequence:

TGGTGTTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGATTAAGAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

72.6

39.2

Major BPS

0.85

0.9

39.9

Major PPT

74.1

0.54

65.8

45.3

Minor 5ss

46.3

-0.4

2.4

58.6

Minor BPS

39.9

-0.7

1.9

51.44

38.4

Associated Gene:

Gene:

TIAM2

Ensembl Gene ID:

ENSAPLG00000005802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046477

52315862 - 52453785

137924

ENSAPLT00000006037

52315862 - 52452749

136888