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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52373023_52377964_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

52373023 - 52377964

Intron Length:

4942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTGC

5'SS Class:

major

3'SS Sequence:

CTGAACTACAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

TCCCTCTGAACT

Flanking Amino Acid:

KWKQYWVTLKGCTLLFYETY

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

67.2

39.2

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

49.8

-0

1.1

48.4

38.3

Minor 5ss

36.4

-1.5

3.4

50.2

46.4

Minor BPS

61.7

0.45

1.5

73.74

43.1

Associated Gene:

Gene:

TIAM2

Ensembl Gene ID:

ENSAPLG00000005802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046477

52315862 - 52453785

137924

ENSAPLT00000006037

52315862 - 52452749

136888