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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52405204_52422705_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52405204 - 52422705

Intron Length:

17502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCAAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TTTCTCTCAAAT

Flanking Amino Acid:

LDNFRKNTANDFSNVPDVTS

Intron Amino Acid Position:

1044

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

77.2

37.6

Major BPS

68.1

0.45

58.1

38.5

Major PPT

69.5

0.44

63.2

36.2

Minor 5ss

35.3

-1.7

3.1

46.5

42.9

Minor BPS

63.8

0.51

1.6

83.13

37.3

Associated Gene:

Gene:

TIAM2

Ensembl Gene ID:

ENSAPLG00000005802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046477

52315862 - 52453785

137924

ENSAPLT00000006037

52315862 - 52452749

136888