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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52422810_52440501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52422810 - 52440501

Intron Length:

17692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCATTTATCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTTATC

Flanking Amino Acid:

HREKTDPPFRSAEQISALCR

Intron Amino Acid Position:

1079

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

74.4

Major BPS

100

1.24

0.5

100

Major PPT

82.1

0.72

0.9

81.9

34.1

Minor 5ss

33.3

-1.9

2.8

33.8

41.1

Minor BPS

64.4

0.44

1.9

34.8

Associated Gene:

Gene:

TIAM2

Ensembl Gene ID:

ENSAPLG00000005802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046477

52315862 - 52453785

137924

ENSAPLT00000006037

52315862 - 52452749

136888