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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52440682_52442316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52440682 - 52442316

Intron Length:

1635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TGTTACATAAAA

Flanking Amino Acid:

LMDTEKSYVKDLSCLFELYL

Intron Amino Acid Position:

1139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

82.6

29.4

Major BPS

77.3

0.68

81.5

Major PPT

85.6

0.8

80.6

31.4

Minor 5ss

35.2

-1.7

49.1

46.7

Minor BPS

55.4

0.17

1.9

72.19

38.7

Associated Gene:

Gene:

TIAM2

Ensembl Gene ID:

ENSAPLG00000005802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046477

52315862 - 52453785

137924

ENSAPLT00000006037

52315862 - 52452749

136888