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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52442386_52442760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52442386 - 52442760

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

ATGTTTTTCACA

Flanking Amino Acid:

QNETFLTQDEMESLFGSLPE

Intron Amino Acid Position:

1162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.4

30.8

Major BPS

73.5

0.58

73.6

32.5

Major PPT

81.3

0.7

0.9

76.3

37.2

Minor 5ss

23.1

-3.1

3.2

Minor BPS

57.8

0.24

1.7

68.54

38.5

Associated Gene:

Gene:

TIAM2

Ensembl Gene ID:

ENSAPLG00000005802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046477

52315862 - 52453785

137924

ENSAPLT00000006037

52315862 - 52452749

136888