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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52444204_52444830_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52444204 - 52444830

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTAT

5'SS Class:

strong_major

3'SS Sequence:

TATTTGTATTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTATTTGTATTT

Flanking Amino Acid:

HIKVQKVLERAKTDSAFKAF

Intron Amino Acid Position:

1240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

85.9

25.1

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

75.9

0.58

0.9

74.6

40.1

Minor 5ss

41.9

-0.9

2.9

58.4

46.2

Minor BPS

47.8

-0

2.1

71.47

40.5

Associated Gene:

Gene:

TIAM2

Ensembl Gene ID:

ENSAPLG00000005802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046477

52315862 - 52453785

137924

ENSAPLT00000006037

52315862 - 52452749

136888