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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52445011_52446362_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52445011 - 52446362

Intron Length:

1352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTGAACCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AATTTTTGAACC

Flanking Amino Acid:

NESEEHYHLTEALKAMEKVA

Intron Amino Acid Position:

1300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

33.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

73.8

0.54

65.7

40.6

Minor 5ss

48.4

-0.1

2.5

68.6

42.1

Minor BPS

64.4

0.43

1.3

70.53

34.1

Associated Gene:

Gene:

TIAM2

Ensembl Gene ID:

ENSAPLG00000005802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046477

52315862 - 52453785

137924

ENSAPLT00000006037

52315862 - 52452749

136888