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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52446482_52447659_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52446482 - 52447659

Intron Length:

1178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TAATTTAACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATAATTTAACG

Flanking Amino Acid:

VADQSGTEKEVTELSMGELL

Intron Amino Acid Position:

1340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

68.4

0.42

63.5

41.4

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

62.1

0.24

1.6

66.59

40.7

Associated Gene:

Gene:

TIAM2

Ensembl Gene ID:

ENSAPLG00000005802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046477

52315862 - 52453785

137924

ENSAPLT00000006037

52315862 - 52452749

136888