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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52447769_52448875_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52447769 - 52448875

Intron Length:

1107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

CTGCAATTAATA

Flanking Amino Acid:

ARKDLELTVFVFKRAVILVY

Intron Amino Acid Position:

1376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

81.4

30.6

Major BPS

0.82

0.8

24.9

Major PPT

92.1

0.95

0.5

89.1

19.9

Minor 5ss

37.4

-1.4

3.3

49.4

41.4

Minor BPS

48.7

-0.1

1.8

58.98

40.7

Associated Gene:

Gene:

TIAM2

Ensembl Gene ID:

ENSAPLG00000005802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046477

52315862 - 52453785

137924

ENSAPLT00000006037

52315862 - 52452749

136888