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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52448935_52449733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52448935 - 52449733

Intron Length:

799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

CTTCTTAGAAAT

Flanking Amino Acid:

KENYKLKKKMPTNVRAGHTY

Intron Amino Acid Position:

1396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

74.2

0.6

39.4

Major PPT

92.4

0.95

0.7

88.3

28.9

Minor 5ss

-1.4

47.2

42.5

Minor BPS

45.2

-0.2

1.7

64.14

39.9

Associated Gene:

Gene:

TIAM2

Ensembl Gene ID:

ENSAPLG00000005802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046477

52315862 - 52453785

137924

ENSAPLT00000006037

52315862 - 52452749

136888