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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52449840_52450386_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52449840 - 52450386

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCATGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AAATACAAAAAT

Flanking Amino Acid:

ALQVRLGNTAGTENSCIWEL

Intron Amino Acid Position:

1431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

83.3

Major BPS

71.2

0.53

70.3

31.9

Major PPT

70.2

0.45

0.9

64.4

35.5

Minor 5ss

42.9

-0.8

2.8

44.3

Minor BPS

43.1

-0.4

60.47

41.9

Associated Gene:

Gene:

TIAM2

Ensembl Gene ID:

ENSAPLG00000005802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046477

52315862 - 52453785

137924

ENSAPLT00000006037

52315862 - 52452749

136888