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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52456950_52468474_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52456950 - 52468474

Intron Length:

11525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATCTACTTAAAT

Flanking Amino Acid:

PGQAFVPKPEVDVAVVHFTP

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

80.7

34.7

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

85.6

0.8

0.6

80.7

24.7

Minor 5ss

43.9

-0.7

2.8

58.4

46.2

Minor BPS

67.4

0.62

1.6

40.1

Associated Gene:

Gene:

TFB1M

Ensembl Gene ID:

ENSAPLG00000006328

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006580

52453899 - 52479720

25822