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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52501959_52504190_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

52501959 - 52504190

Intron Length:

2232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

ATTACAGCAACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATTACAGCAACA

Flanking Amino Acid:

EFKQLAEKHPSIGVFFCGPK

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

59.6

0.22

1.1

52.3

41.2

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

44.9

-0.3

2.4

64.5

41.3

Associated Gene:

Gene:

NOX3

Ensembl Gene ID:

ENSAPLG00000006709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007001

52501838 - 52540719

38882