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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52520608_52523555_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52520608 - 52523555

Intron Length:

2948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

CAACTTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATA

Flanking Amino Acid:

LPQFSGKKPVAWKWVLSPVV

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

71.6

38.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.9

0.51

0.9

35.3

Minor 5ss

34.2

-1.8

3.5

44.2

44.6

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

NOX3

Ensembl Gene ID:

ENSAPLG00000006709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007001

52501838 - 52540719

38882