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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52566678_52593419_R

Intron Information:

Intron Rank:

149344

Intron Class:

major

Intron Phase:

Intron Coordinates:

52566678 - 52593419

Intron Length:

26742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TTATATTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.3

40.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.8

0.81

0.8

80.3

36.7

Minor 5ss

38.5

-1.3

3.4

55.3

48.9

Minor BPS

79.8

1.01

88.33

30.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044878

52566606 - 52597589

30984