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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52754810_52754927_F

Intron Information:

Intron Rank:

139216

Intron Class:

major

Intron Phase:

Intron Coordinates:

52754810 - 52754927

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CATCTCACTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TATTCTGTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.2

28.9

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

69.8

0.45

0.8

63.5

32.4

Minor 5ss

29.1

-2.4

3.2

36.8

41.9

Minor BPS

0.24

2.3

80.6

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040550

52754207 - 52756456

2250