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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52790253_52790951_R

Intron Information:

Intron Rank:

134093

Intron Class:

major

Intron Phase:

Intron Coordinates:

52790253 - 52790951

Intron Length:

699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCATAC

U12 Branch Point Sequence:

AATTTCCTACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

73.3

37.4

Major BPS

55.5

0.14

52.7

33.8

Major PPT

81.8

0.72

0.7

76.4

25.8

Minor 5ss

40.6

-1.1

2.7

45.4

Minor BPS

51.7

0.05

1.9

67.41

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041963

52790195 - 52799760

9566

ENSAPLT00000029161

52788776 - 52798459

9684