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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52791823_52798128_R

Intron Information:

Intron Rank:

134095

Intron Class:

major

Intron Phase:

Intron Coordinates:

52791823 - 52798128

Intron Length:

6306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGTTG

5'SS Class:

major

3'SS Sequence:

TCCTTCTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TGGTCTACAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.2

43.6

Major BPS

72.5

0.56

1.2

39.9

Major PPT

0.58

74.7

Minor 5ss

-1.2

3.6

55.1

49.2

Minor BPS

53.8

0.2

1.9

74.1

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029161

52788776 - 52798459

9684