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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52842718_52846407_R

Intron Information:

Intron Rank:

153679

Intron Class:

major

Intron Phase:

Intron Coordinates:

52842718 - 52846407

Intron Length:

3690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGAGG

5'SS Class:

major

3'SS Sequence:

TGTGTTTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGCAA

U12 Branch Point Sequence:

TGTGTTTGCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

62.2

43.8

Major BPS

50.7

0.02

1.5

63.4

44.3

Major PPT

73.1

0.52

68.1

42.3

Minor 5ss

26.4

-2.7

2.9

27.5

37.7

Minor BPS

45.9

-0.3

1.9

59.91

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017974

52841658 - 52846476

4819