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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52862346_52869978_R

Intron Information:

Intron Rank:

152141

Intron Class:

major

Intron Phase:

Intron Coordinates:

52862346 - 52869978

Intron Length:

7633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTCCCTATCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTTTCCCTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

73.4

32.4

Major BPS

76.9

0.67

66.3

40.4

Major PPT

81.4

0.71

0.8

73.9

35.7

Minor 5ss

31.8

-2.1

2.7

38.8

40.3

Minor BPS

66.8

0.51

1.9

83.37

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029444

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032192

52851115 - 52870604

19490

ENSAPLT00000030081

52857751 - 52870375

12625