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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52887592_52890067_R

Intron Information:

Intron Rank:

155055

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

52887592 - 52890067

Intron Length:

2476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCCTGT

5'SS Class:

weak_minor

3'SS Sequence:

TATTCTTTTTCAG|C

3'SS Class:

minor_hybrid

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TGCTCATCTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.43

1.2

62.3

44.7

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

90.4

0.91

0.7

88.7

27.9

Minor 5ss

75.2

0.85

1.8

82.7

36.6

Minor BPS

46.2

-0.2

2.1

66.33

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030923

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029250

52887588 - 52978629

91042