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Intron Name: Anas_platyrhynchos_platyrhynchos_3_52890143_52977979_R

Intron Information:

Intron Rank:

155056

Intron Class:

major

Intron Phase:

Intron Coordinates:

52890143 - 52977979

Intron Length:

87837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

AGCCCCCAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

95.4

1.02

0.6

88.7

28.3

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

45.9

-0.2

1.9

61.34

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030923

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029250

52887588 - 52978629

91042