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Intron Name: Anas_platyrhynchos_platyrhynchos_3_5294783_5299655_F

Intron Information:

Intron Rank:

127512

Intron Class:

major

Intron Phase:

Intron Coordinates:

5294783 - 5299655

Intron Length:

4873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

AAATCTATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTTGTCAAAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

71.8

0.49

67.5

42.5

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

48.5

-0.1

66.2

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044660

5294583 - 5303308

8726

ENSAPLT00000024508

5294583 - 5303308

8726