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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53148870_53149539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53148870 - 53149539

Intron Length:

670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

ACTGTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

AGGTTAATAACT

Flanking Amino Acid:

MGKYLARRDMSQEGYGTR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

72.5

39.9

Major BPS

70.1

0.5

70.3

31.9

Major PPT

83.5

0.75

0.8

80.8

36.2

Minor 5ss

45.1

-0.5

2.8

54.8

43.4

Minor BPS

49.6

0.05

1.9

69.27

41.1

Associated Gene:

Gene:

ARID1B

Ensembl Gene ID:

ENSAPLG00000007574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007893

53148846 - 53368738

219893