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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53149651_53270393_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53149651 - 53270393

Intron Length:

120743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGAAAC

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAG

U12 Branch Point Sequence:

TAGTTCGTACTT

Flanking Amino Acid:

IQQERPSSLPDLSGSIDDLP

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

69.2

35.6

Major BPS

59.7

0.24

1.5

57.6

41.3

Major PPT

92.5

0.96

0.6

92.6

17.3

Minor 5ss

-1.6

49.6

40.5

Minor BPS

47.4

-0.1

2.2

67.88

43.8

Associated Gene:

Gene:

ARID1B

Ensembl Gene ID:

ENSAPLG00000007574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032220

53081748 - 53399282

317535