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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53446322_53447569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53446322 - 53447569

Intron Length:

1248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGGGA

5'SS Class:

major

3'SS Sequence:

CTTTTCTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTCTTAAACT

Flanking Amino Acid:

AAQDEVFLIKGGIFLGTVAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

60.3

40.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.7

0.67

0.9

77.2

31.6

Minor 5ss

22.1

-3.2

3.4

43.5

Minor BPS

74.9

0.86

1.6

90.07

34.1

Associated Gene:

Gene:

TMEM242

Ensembl Gene ID:

ENSAPLG00000021932

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043566

53440836 - 53447687

6852