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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53459123_53460790_F

Intron Information:

Intron Rank:

125144

Intron Class:

major

Intron Phase:

Intron Coordinates:

53459123 - 53460790

Intron Length:

1668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

CTGCTCTCCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

79.7

35.3

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

76.6

0.6

0.8

70.1

29.1

Minor 5ss

41.2

-1

2.9

54.5

43.9

Minor BPS

-0.1

64.85

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020208

53459081 - 53462957

3877