Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_53523062_53536823_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53523062 - 53536823

Intron Length:

13762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACAATG

5'SS Class:

major

3'SS Sequence:

TTTCCATGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

CAAAACTTAATG

Flanking Amino Acid:

DEAADLERQIDIANGSSSGG

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.1

75.5

40.6

Major BPS

78.2

0.7

77.9

32.1

Major PPT

75.3

0.57

0.9

74.2

35.5

Minor 5ss

42.6

-0.8

57.6

46.6

Minor BPS

50.6

-0.1

1.6

51.44

42.6

Associated Gene:

Gene:

ZDHHC14

Ensembl Gene ID:

ENSAPLG00000015573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035343

53466869 - 53573158

106290

ENSAPLT00000016255

53466171 - 53572301

106131