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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53635678_53636409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53635678 - 53636409

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TCTCTTGCAACT

Flanking Amino Acid:

RGLVPTDYVEIITDSTKDGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

84.9

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

88.3

0.86

0.7

86.1

26.6

Minor 5ss

-1.9

3.2

42.9

44.7

Minor BPS

46.6

-0.1

2.1

68.64

42.7

Associated Gene:

Gene:

SNX9

Ensembl Gene ID:

ENSAPLG00000015762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037492

53626248 - 53672463

46216

ENSAPLT00000016467

53626248 - 53673905

47658