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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53648147_53648916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53648147 - 53648916

Intron Length:

770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGCTAA

5'SS Class:

major

3'SS Sequence:

TCCCCTACGTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AAACATTTAACT

Flanking Amino Acid:

FGHPQAYQGPAAADDDDWDD

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

68.9

33.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

62.7

0.29

0.9

62.5

33.2

Minor 5ss

43.8

-0.7

2.8

54.8

49.4

Minor BPS

59.9

0.39

1.5

71.53

38.5

Associated Gene:

Gene:

SNX9

Ensembl Gene ID:

ENSAPLG00000015762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037492

53626248 - 53672463

46216

ENSAPLT00000016467

53626248 - 53673905

47658