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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53650549_53651461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53650549 - 53651461

Intron Length:

913

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGCCGT

5'SS Class:

major

3'SS Sequence:

CAATTTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

GTTGAATTAAAC

Flanking Amino Acid:

AKPKEKIPIIIGDYGPMWVY

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.1

58.3

46.1

Major BPS

73.8

0.59

0.9

26.8

Major PPT

79.4

0.66

0.9

73.4

36.5

Minor 5ss

42.2

-0.9

3.2

62.6

Minor BPS

48.2

-0.1

63.08

41.5

Associated Gene:

Gene:

SNX9

Ensembl Gene ID:

ENSAPLG00000015762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037492

53626248 - 53672463

46216

ENSAPLT00000016467

53626248 - 53673905

47658