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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53651588_53651905_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53651588 - 53651905

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

CTTTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

CTTTCTTTTACA

Flanking Amino Acid:

SYIEYQLTCTNTNRSVNHRY

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

74.8

35.3

Major BPS

83.8

0.84

73.6

41.8

Major PPT

91.9

0.94

0.6

87.1

23.5

Minor 5ss

39.2

-1.2

3.4

45.5

Minor BPS

70.8

0.65

1.6

78.96

37.6

Associated Gene:

Gene:

SNX9

Ensembl Gene ID:

ENSAPLG00000015762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016467

53626248 - 53673905

47658

ENSAPLT00000037492

53626248 - 53672463

46216