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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53652024_53654664_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53652024 - 53654664

Intron Length:

2641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGTT

5'SS Class:

strong_major

3'SS Sequence:

TAATGTGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TATTGTTTAATG

Flanking Amino Acid:

IPSLPDKQVTGRFEEEFIKM

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

87.7

26.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

64.3

0.32

1.1

58.4

45.8

Minor 5ss

-1.4

3.5

57.8

46.8

Minor BPS

62.8

0.26

1.8

68.01

40.3

Associated Gene:

Gene:

SNX9

Ensembl Gene ID:

ENSAPLG00000015762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037492

53626248 - 53672463

46216

ENSAPLT00000016467

53626248 - 53673905

47658