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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53654796_53656151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53654796 - 53656151

Intron Length:

1356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCATTCCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CAATTTTTAATT

Flanking Amino Acid:

QQFLNFRDEKEWKTGKRKAE

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.6

40.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.5

0.46

68.3

37.7

Minor 5ss

31.4

-2.1

3.1

46.4

Minor BPS

0.61

1.2

73.01

38.5

Associated Gene:

Gene:

SNX9

Ensembl Gene ID:

ENSAPLG00000015762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037492

53626248 - 53672463

46216

ENSAPLT00000016467

53626248 - 53673905

47658