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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53660238_53662902_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53660238 - 53662902

Intron Length:

2665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTATGCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

CATCCCTTTATG

Flanking Amino Acid:

GQEHWKRCTGPLPKEYQKIG

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.3

81.8

38.5

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

81.3

0.7

0.9

77.9

36.3

Minor 5ss

42.6

-0.8

2.9

41.5

Minor BPS

54.5

-0

1.7

57.8

43.7

Associated Gene:

Gene:

SNX9

Ensembl Gene ID:

ENSAPLG00000015762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037492

53626248 - 53672463

46216

ENSAPLT00000016467

53626248 - 53673905

47658