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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53669316_53670689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53669316 - 53670689

Intron Length:

1374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTCTTTTAATC

Flanking Amino Acid:

CFPDIIGAHKGAIERVKESD

Intron Amino Acid Position:

510

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

36.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.3

0.79

0.8

80.2

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

63.4

0.4

1.2

65.17

34.8

Associated Gene:

Gene:

SNX9

Ensembl Gene ID:

ENSAPLG00000015762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037492

53626248 - 53672463

46216

ENSAPLT00000016467

53626248 - 53673905

47658