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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53670805_53672197_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53670805 - 53672197

Intron Length:

1393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

GGTCCAATTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

CTTCTCTTAAAT

Flanking Amino Acid:

RVSTMAYALQAEMNHFHSNR

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

71.2

0.53

70.3

31.9

Major PPT

67.7

0.4

58.6

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

70.3

0.72

1.4

82.38

38.6

Associated Gene:

Gene:

SNX9

Ensembl Gene ID:

ENSAPLG00000015762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016467

53626248 - 53673905

47658

ENSAPLT00000037492

53626248 - 53672463

46216