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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53698590_53698715_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

53698590 - 53698715

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAATTTTG

5'SS Class:

major

3'SS Sequence:

TTTTGTATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

GAACACTAAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

73.6

37.7

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

0.83

0.8

81.8

34.6

Minor 5ss

46.3

-0.4

2.8

62.9

41.7

Minor BPS

49.3

0.03

1.9

66.03

43.4

Associated Gene:

Gene:

SYNJ2

Ensembl Gene ID:

ENSAPLG00000002563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035800

53697778 - 53753902

56125