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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53698803_53707061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53698803 - 53707061

Intron Length:

8259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TATCGCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACTAT

U12 Branch Point Sequence:

CCTTCTGTAACT

Flanking Amino Acid:

GCLGELQLKCGNARLHFLVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.6

30.7

Major BPS

54.3

0.11

1.3

53.1

42.3

Major PPT

72.3

0.5

0.9

62.8

39.3

Minor 5ss

33.1

-1.9

3.2

40.3

40.2

Minor BPS

61.6

0.44

2.1

78.9

Associated Gene:

Gene:

SYNJ2

Ensembl Gene ID:

ENSAPLG00000002563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017388

53690370 - 53753970

63601