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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53720427_53722980_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53720427 - 53722980

Intron Length:

2554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTGTA

5'SS Class:

major

3'SS Sequence:

ACTTTTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

TGTTCTGTACTT

Flanking Amino Acid:

DRNAGWYEKERHMMLLKEQY

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.3

74.1

36.6

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

75.2

0.57

0.9

70.1

35.8

Minor 5ss

37.8

-1.4

3.1

49.5

46.8

Minor BPS

50.2

0.08

2.2

75.88

41.7

Associated Gene:

Gene:

SYNJ2

Ensembl Gene ID:

ENSAPLG00000002563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017388

53690370 - 53753970

63601

ENSAPLT00000002654

53700236 - 53753902

53667