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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53726663_53727067_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53726663 - 53727067

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTACTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTTAC

U12 Branch Point Sequence:

TGTTTGGTTACT

Flanking Amino Acid:

IFAKGENVSPRLQTGTFRMN

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

77.9

Major BPS

56.3

0.16

1.3

49.1

Major PPT

65.2

0.34

1.1

65.4

40.2

Minor 5ss

31.3

-2.1

3.3

40.8

45.4

Minor BPS

43.5

-0.4

2.8

71.99

44.9

Associated Gene:

Gene:

SYNJ2

Ensembl Gene ID:

ENSAPLG00000002563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035800

53697778 - 53753902

56125

ENSAPLT00000017388

53690370 - 53753970

63601

ENSAPLT00000002654

53700236 - 53753902

53667