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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53727787_53728384_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53727787 - 53728384

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGCCA

5'SS Class:

major

3'SS Sequence:

CCTCTTCCATCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

CCCTCTTCCATC

Flanking Amino Acid:

KMLMDHTALLVTPSILKAMS

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.2

42.9

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

75.1

0.57

0.8

74.1

29.5

Minor 5ss

30.6

-2.2

3.2

31.7

42.2

Minor BPS

44.6

-0.4

1.9

49.09

42.4

Associated Gene:

Gene:

SYNJ2

Ensembl Gene ID:

ENSAPLG00000002563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035800

53697778 - 53753902

56125

ENSAPLT00000017388

53690370 - 53753970

63601

ENSAPLT00000002654

53700236 - 53753902

53667