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Intron Name: Anas_platyrhynchos_platyrhynchos_3_53736696_53738745_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53736696 - 53738745

Intron Length:

2050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCTGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

TGTGTTTGAAAT

Flanking Amino Acid:

WRKKLPFEKTAGEINLLDSD

Intron Amino Acid Position:

760

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

70.5

41.4

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

70.1

0.45

64.6

41.4

Minor 5ss

35.8

-1.6

2.6

44.7

Minor BPS

51.3

0.12

1.6

70.27

40.6

Associated Gene:

Gene:

SYNJ2

Ensembl Gene ID:

ENSAPLG00000002563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017388

53690370 - 53753970

63601

ENSAPLT00000002654

53700236 - 53753902

53667

ENSAPLT00000035800

53697778 - 53753902

56125